PoplarV1, Main, Exploration, bibRecord, 002E77

Functional analysis of the grapevine paralogs of the SMG7 NMD factor using a heterolog VIGS-based gene depletion-complementation system.

Identifieur interne : 002E77 ( Main/Exploration ); précédent : 002E76; suivant : 002E78

Functional analysis of the grapevine paralogs of the SMG7 NMD factor using a heterolog VIGS-based gene depletion-complementation system.

Auteurs : Anna Hangyáné Benkovics [Hongrie] ; Tünde Nyik ; Zsuzsanna Mérai ; Dániel Silhavy ; György Dénes Bisztray

Source :

Plant molecular biology [ 1573-5028 ] ; 2011.

RBID : pubmed:21234790

Descripteurs français

English descriptors

KwdEn :
- Amino Acid Sequence (MeSH), Arabidopsis (genetics), Arabidopsis (metabolism), Carrier Proteins (chemistry), Carrier Proteins (genetics), Carrier Proteins (metabolism), Conserved Sequence (MeSH), Gene Deletion (MeSH), Gene Expression Regulation, Plant (MeSH), Molecular Sequence Data (MeSH), Phylogeny (MeSH), Protein Binding (MeSH), RNA Stability (MeSH), RNA, Messenger (metabolism), Sequence Alignment (MeSH), Tobacco (genetics), Tobacco (metabolism), Vitis (genetics), Vitis (metabolism).
MESH :
- chemical , chemistry : Carrier Proteins.
- genetics : Arabidopsis, Carrier Proteins, Tobacco, Vitis.
- metabolism : Arabidopsis, Carrier Proteins, RNA, Messenger, Tobacco, Vitis.
- Amino Acid Sequence, Conserved Sequence, Gene Deletion, Gene Expression Regulation, Plant, Molecular Sequence Data, Phylogeny, Protein Binding, RNA Stability, Sequence Alignment.

Abstract

Nonsense-mediated mRNA decay (NMD) is a eukaryotic quality control system that identifies and eliminates transcripts having a premature translation termination codon (PTC). NMD is also involved in the control of several wild-type mRNAs. The NMD core machinery consists of three highly conserved NMD factors (UPF1, UPF2 and UPF3) and at least one less conserved 14-3-3-like domain containing protein (SMG7). A PTC is identified by UPF factors, and then SMG7 triggers rapid transcript decay. UPF factors are generally encoded by a single gene, whereas SMG7 has duplicated several times during evolution. Recently it was reported that the plant SMG7 is autoregulated through NMD and that SMG7 has two relatively divergent paralogs in dicots, SMG7 and SMG7L. In mammals all three SMG7 related genes (SMG5, SMG6 and SMG7) are essential in NMD, so we hypothesized that in plants the SMG7 and SMG7L duplicates may also play distinct roles in NMD. To test this possibility, we have analyzed the evolution and the function of plant SMG7 homologs. We show that SMG7L is not required for plant NMD. Interestingly, we found that the grapevine and poplar genomes contain two quite divergent SMG7 paralogs which may have derived from an ancient duplication event. Using heterolog depletion/complementation assays we demonstrate that both grapevine SMG7 copies retained the complete NMD activity and both of them are under NMD control, whilst SMG7L has lost NMD activity and NMD control.

DOI: 10.1007/s11103-010-9726-0
PubMed: 21234790

Affiliations:

Hongrie

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Le document en format XML

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<front><div type="abstract" xml:lang="en">Nonsense-mediated mRNA decay (NMD) is a eukaryotic quality control system that identifies and eliminates transcripts having a premature translation termination codon (PTC). NMD is also involved in the control of several wild-type mRNAs. The NMD core machinery consists of three highly conserved NMD factors (UPF1, UPF2 and UPF3) and at least one less conserved 14-3-3-like domain containing protein (SMG7). A PTC is identified by UPF factors, and then SMG7 triggers rapid transcript decay. UPF factors are generally encoded by a single gene, whereas SMG7 has duplicated several times during evolution. Recently it was reported that the plant SMG7 is autoregulated through NMD and that SMG7 has two relatively divergent paralogs in dicots, SMG7 and SMG7L. In mammals all three SMG7 related genes (SMG5, SMG6 and SMG7) are essential in NMD, so we hypothesized that in plants the SMG7 and SMG7L duplicates may also play distinct roles in NMD. To test this possibility, we have analyzed the evolution and the function of plant SMG7 homologs. We show that SMG7L is not required for plant NMD. Interestingly, we found that the grapevine and poplar genomes contain two quite divergent SMG7 paralogs which may have derived from an ancient duplication event. Using heterolog depletion/complementation assays we demonstrate that both grapevine SMG7 copies retained the complete NMD activity and both of them are under NMD control, whilst SMG7L has lost NMD activity and NMD control.</div>
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<ReferenceList><Reference><Citation>Nat Struct Mol Biol. 2010 Oct;17(10):1269-71</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20818392</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol Methods. 2009 Feb;155(2):167-74</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19010356</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2009 Feb 17;106(7):2453-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19181858</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genes Dev. 2001 Sep 1;15(17):2215-28</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11544179</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Rep. 2009 Jan;28(1):21-30</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18818929</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 1999 Mar;11(3):471-84</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10072405</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2006 Aug;47(3):480-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16813578</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Struct Mol Biol. 2006 May;13(5):462-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16622410</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genetics. 1999 Feb;151(2):605-16</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9927455</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Cell Sci. 2008 Jul 1;121(Pt 13):2208-16</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18544632</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genes Dev. 2006 Feb 1;20(3):355-67</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16452507</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Hered. 2009 Sep-Oct;100(5):605-17</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19596713</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2003 Jul 10;424(6945):194-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12853957</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Physiol. 2006 May;47(5):572-80</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16540482</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Cell Biol. 2009 Jul;29(13):3517-28</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19414594</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2006;34(21):6147-57</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17088291</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2004 Nov 4;432(7013):112-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15525991</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 2003 Aug 1;22(15):3960-70</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12881430</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Biol. 2008 Apr 29;6(4):e111</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18447585</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Biochem Sci. 1998 Jun;23(6):198-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9644970</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEBS Lett. 2009 Feb 4;583(3):499-505</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19162024</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Struct Mol Biol. 2009 Jan;16(1):49-55</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19060897</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 2002 Jun 17;21(12):3070-80</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12065420</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Cell. 1999 Aug;4(2):153-66</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10488331</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Biochemistry (Mosc). 2006 Dec;71(12):1377-84</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17223792</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 2003 Feb 3;22(3):641-50</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12554664</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>RNA. 2009 Jul;15(7):1265-73</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19474145</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Rep. 2008 May;27(5):845-53</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18256839</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 2000 Dec 15;19(24):6860-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11118221</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genes Dev. 2007 May 1;21(9):1075-85</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17437990</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2007 Dec 19;2(12):e1326</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18094749</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 2001 Sep 3;20(17):4987-97</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11532962</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Cell. 2003 Nov;12(5):1187-200</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14636577</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Mol Biol. 2009 Nov;71(4-5):367-78</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19653106</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Cell. 2005 Feb 18;17(4):537-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15721257</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 2008 Jun 4;27(11):1585-95</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18451801</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2005 Sep 23;309(5743):2010-3</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16179466</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Struct Mol Biol. 2009 Jul;16(7):747-53</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19503078</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Cell. 2004 Nov 19;16(4):587-96</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15546618</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2009 Dec;60(6):1031-42</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19754518</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2001 Jan;25(2):237-45</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11169199</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2005 Aug;43(4):530-40</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16098107</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2006 Jul;47(1):49-62</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16740149</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Physiol. 2007 Jul;48(7):1072-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17567637</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Biochem Sci. 2006 Nov;31(11):639-46</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17010613</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>RNA. 2005 Oct;11(10):1530-44</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16199763</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2004 Dec;136(4):3999-4009</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15591447</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2007;35(22):7688-97</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17984081</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>RNA. 2008 Dec;14(12):2609-17</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18974281</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Biochem Soc Trans. 2008 Jun;36(Pt 3):497-501</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18481988</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2007 Aug;24(8):1596-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17488738</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2006 Oct;18(10):2767-81</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17041150</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Genet Genomics. 2010 May;283(5):493-501</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20361338</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2007 Sep 27;449(7161):463-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17721507</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
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Functional analysis of the grapevine paralogs of the SMG7 NMD factor using a heterolog VIGS-based gene depletion-complementation system.

Functional analysis of the grapevine paralogs of the SMG7 NMD factor using a heterolog VIGS-based gene depletion-complementation system.

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